For computing the functional dendogram — fw_fdendro • fwtraits

For computing the functional dendogram

Usage

fw_fdendro(fwdata, method = "average", k = 4, plot = FALSE)

Arguments

fwdata: list A list from the fw_fetchdata function is the only data type accepted.
method: string Clustering method, including ward, average, and complete
k: integer Determine the number of cluster the user wants to output after data clustering. The default is 4.
plot: logical Either TRUE to show the plot of functional dendogram. Defualt is FALSE.

Value

dataframe, plot

Examples


if (FALSE) { # \dontrun{
  fishtraits <- fw_fetchdata(data = speciesdata,
                        ecoparams = c('rheophily habitat', 'spawning habitat',
                        'feeding diet adult'),
                        taxonomic_column = 'scientificName',
                        organismgroup = 'fi')


 head(fdendoclust, 3)

 table(fdendoclust$cluster)

} # }